Iran Variome MPS Database
GALNS (galactosamine (N-acetyl)-6-sulfatase)
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View GALNS gene homepage
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View all transcripts of gene GALNS
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View all variants in gene GALNS
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View all diseases associated with gene GALNS
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Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
Template
: Template(s) used to detect the sequence variant; DNA = genomic DNA, RNA = RNA (cDNA).
All options:
DNA
RNA = RNA (cDNA)
Protein
? = unknown
Technique
: Technique(s) used to identify the sequence variant.
All options:
? = Unknown
arrayCGH = array for Comparative Genomic Hybridisation
arraySEQ = array for resequencing
arraySNP = array for SNP typing
arrayCNV = array for Copy Number Variation (SNP and CNV probes)
BESS = Base Excision Sequence Scanning
CMC = Chemical Mismatch Cleavage
CSCE = Conformation Sensitive Capillary Electrophoresis
DGGE = Denaturing-Gradient Gel-Electrophoresis
DHPLC = Denaturing High-Performance Liquid Chromatography
DOVAM = Detection Of Virtually All Mutations (SSCA variant)
ddF = dideoxy Fingerprinting
DSCA = Double-Strand DNA Conformation Analysis
EMC = Enzymatic Mismatch Cleavage
HD = HeteroDuplex analysis
MCA = high-resolution Melting Curve Analysis (hrMCA)
IHC = Immuno-Histo-Chemistry
MAPH = Multiplex Amplifiable Probe Hybridisation
MLPA = Multiplex Ligation-dependent Probe Amplification
SEQ-NG = Next-Generation Sequencing
SEQ-NG-H = Next-Generation Sequencing - Helicos
SEQ-NG-I = Next-Generation Sequencing - Illumina/Solexa
SEQ-NG-R = Next-Generation Sequencing - Roche/454
SEQ-NG-S = Next-Generation Sequencing - SOLiD
Northern = Northern blotting
PCR = Polymerase Chain Reaction
PCRdig = PCR + restriction enzyme digestion
PCRlr = PCR, long-range
PCRm = PCR, multiplex
PCRq = PCR, quantitative
PAGE = Poly-Acrylamide Gel-Electrophoresis
PTT = Protein Truncation Test
PFGE = Pulsed-Field Gel-Electrophoresis (+Southern)
RT-PCR = Reverse Transcription and PCR
SEQ = SEQuencing
SBE = Single Base Extension
SSCA = Single-Strand DNA Conformation polymorphism Analysis (SSCP)
SSCAf = SSCA, fluorescent (SSCP)
Southern = Southern blotting
TaqMan = TaqMan assay
Western = Western Blotting
How to query this table
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Operator
Column type
Example
Matches
Text
Arg
all entries containing 'Arg'
space
Text
Arg Ser
all entries containing 'Arg' and 'Ser'
|
Text
Arg|Ser
all entries containing 'Arg' or 'Ser'
!
Text
!fs
all entries not containing 'fs'
^
Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
all entries with this field empty
=""
Text
="p.0"
all entries exactly matching 'p.0'
!=""
Text
!=""
all entries with this field not empty
!=""
Text
!="p.0"
all entries not exactly matching 'p.0?'
combination
Text
*|Ter !fs
all entries containing '*' or 'Ter' but not containing 'fs'
Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
To sort on a certain column, click on the column header or on the arrows. If that column is already selected to sort on, the sort order will be swapped. The column currently sorted on has a darker blue background color than the other columns. The up and down arrows next to the column name indicate the current sorting direction. When sorting on any field other than the default, LOVD will sort secondarily on the default sort column.
89 entries on 1 page. Showing entries 1 - 89.
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Legend
How to query
Screening ID
Individual ID
Template
Technique
Variants found
Owner
0000000010
00000009
DNA
SEQ-NG
1
Variome.ir
0000000016
00000014
DNA
SEQ-NG
1
Variome.ir
0000000017
00000015
DNA
SEQ-NG
1
Variome.ir
0000000019
00000017
DNA
SEQ-NG
1
Variome.ir
0000000023
00000021
DNA
SEQ-NG
1
Variome.ir
0000000025
00000023
DNA
SEQ-NG
1
Variome.ir
0000000026
00000024
DNA
SEQ-NG
1
Variome.ir
0000000027
00000025
DNA
SEQ-NG
1
Variome.ir
0000000029
00000027
DNA
SEQ
1
Variome.ir
0000000035
00000032
DNA
SEQ-NG
1
Variome.ir
0000000038
00000035
DNA
SEQ-NG
1
Variome.ir
0000000041
00000038
DNA
SEQ-NG
1
Variome.ir
0000000042
00000039
DNA
SEQ-NG
2
Variome.ir
0000000047
00000044
DNA
SEQ-NG
2
Variome.ir
0000000049
00000046
DNA
SEQ-NG
1
Variome.ir
0000000050
00000047
DNA
SEQ-NG
1
Variome.ir
0000000053
00000050
DNA
SEQ-NG
1
Variome.ir
0000000056
00000053
DNA
SEQ-NG
2
Variome.ir
0000000060
00000057
DNA
SEQ-NG
2
Variome.ir
0000000072
00000069
DNA
SEQ-NG
1
Variome.ir
0000000073
00000070
DNA
SEQ
1
Variome.ir
0000000074
00000071
DNA
SEQ
1
Variome.ir
0000000075
00000072
DNA
SEQ
1
Variome.ir
0000000078
00000075
DNA
SEQ-NG
1
Variome.ir
0000000081
00000078
DNA
SEQ
1
Variome.ir
0000000082
00000079
DNA
SEQ-NG
1
Variome.ir
0000000083
00000080
DNA
SEQ
1
Variome.ir
0000000087
00000084
DNA
SEQ-NG
1
Variome.ir
0000000088
00000085
DNA
arraySNP
1
Variome.ir
0000000093
00000090
DNA
SEQ
1
Variome.ir
0000000094
00000091
DNA
SEQ-NG
1
Variome.ir
0000000102
00000099
DNA
SEQ-NG
1
Variome.ir
0000000103
00000100
DNA
SEQ-NG
1
Variome.ir
0000000105
00000102
DNA
SEQ-NG
1
Variome.ir
0000000106
00000103
DNA
SEQ-NG
1
Variome.ir
0000000109
00000106
DNA
SEQ-NG
1
Variome.ir
0000000117
00000114
DNA
SEQ-NG
2
Variome.ir
0000000120
00000117
DNA
arrayCGH
1
Variome.ir
0000000121
00000118
DNA
SEQ-NG
1
Variome.ir
0000000124
00000121
DNA
SEQ-NG
1
Variome.ir
0000000129
00000126
DNA
SEQ
1
Variome.ir
0000000135
00000132
DNA
SEQ-NG
1
Variome.ir
0000000136
00000133
DNA
SEQ
1
Variome.ir
0000000137
00000134
DNA
SEQ-NG
1
Variome.ir
0000000142
00000139
DNA
SEQ-NG
1
Variome.ir
0000000144
00000141
DNA
SEQ-NG
1
Variome.ir
0000000149
00000146
DNA
SEQ-NG
1
Variome.ir
0000000152
00000148
DNA
SEQ-NG
1
Variome.ir
0000000153
00000149
DNA
arraySEQ
1
Variome.ir
0000000154
00000150
DNA
SEQ-NG
1
Variome.ir
0000000156
00000152
DNA
SEQ-NG
1
Variome.ir
0000000157
00000153
DNA
arraySEQ
1
Variome.ir
0000000158
00000154
DNA
SEQ-NG
1
Variome.ir
0000000161
00000157
DNA
SEQ-NG
1
Variome.ir
0000000165
00000161
DNA
SEQ-NG
1
Variome.ir
0000000166
00000162
DNA
SEQ
1
Variome.ir
0000000168
00000164
DNA
SEQ-NG
1
Variome.ir
0000000169
00000165
DNA
SEQ
1
Variome.ir
0000000170
00000166
DNA
SEQ-NG
1
Variome.ir
0000000176
00000172
DNA
SEQ-NG
1
Variome.ir
0000000180
00000176
DNA
SEQ-NG
1
Variome.ir
0000000183
00000179
DNA
SEQ-NG
2
Variome.ir
0000000184
00000181
DNA
SEQ-NG
1
Variome.ir
0000000186
00000182
DNA
SEQ-NG
1
Variome.ir
0000000189
00000185
DNA
SEQ-NG
1
Variome.ir
0000000197
00000193
DNA
SEQ-NG
1
Variome.ir
0000000199
00000195
DNA
SEQ-NG
1
Variome.ir
0000000201
00000197
DNA
SEQ-NG
1
Variome.ir
0000000203
00000199
DNA
SEQ-NG
1
Variome.ir
0000000211
00000207
DNA
arraySEQ
1
Variome.ir
0000000214
00000211
DNA
SEQ-NG
1
Variome.ir
0000000217
00000214
DNA
SEQ-NG
1
Variome.ir
0000000223
00000220
DNA
SEQ-NG
1
Variome.ir
0000000228
00000225
DNA
SEQ-NG
1
Variome.ir
0000000232
00000229
DNA
SEQ
1
Variome.ir
0000000233
00000230
DNA
SEQ-NG
1
Variome.ir
0000000234
00000231
DNA
SEQ-NG
1
Variome.ir
0000000239
00000236
DNA
SEQ
2
Variome.ir
0000000240
00000237
DNA
SEQ-NG
1
Variome.ir
0000000241
00000238
DNA
SEQ-NG
1
Variome.ir
0000000244
00000241
DNA
SEQ-NG
1
Variome.ir
0000000249
00000246
DNA
SEQ-NG
1
Variome.ir
0000000251
00000248
DNA
SEQ
1
Variome.ir
0000000252
00000249
DNA
SEQ-NG
1
Variome.ir
0000000256
00000253
DNA
SEQ-NG
1
Variome.ir
0000000257
00000254
DNA
SEQ-NG
1
Variome.ir
0000000259
00000256
DNA
SEQ-NG
1
Variome.ir
0000000270
00000267
DNA
SEQ-NG
1
Variome.ir
0000000271
00000268
DNA
SEQ-NG
1
Variome.ir
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How to query
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